In this paper we consider two non-parametric estimation methods for software reliability assessment without specifying the fault-detection time distribution, where the underlying stochastic process to describe software fault-counts in the system testing is given by a non-homogeneous Poisson process. The resulting data-driven methodologies can give the useful probabilistic information on the software reliability assessment under the incomplete knowledge on fault-detection time distribution. Throughout examples with real software fault data, it is shown that the proposed methods provide more accurate estimation results than the common parametric approach.