Application Mapping and Scheduling of Uncertain Communication Patterns onto Non-Random and Random Network Topologies

Yao HU; Michihiro KOIBUCHI

doi:10.1587/transinf.2020PAP0006

Application Mapping and Scheduling of Uncertain Communication Patterns onto Non-Random and Random Network Topologies

Yao HU, Michihiro KOIBUCHI

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Due to recent technology progress based on big-data processing, many applications present irregular or unpredictable communication patterns among compute nodes in high-performance computing (HPC) systems. Traditional communication infrastructures, e.g., torus or fat-tree interconnection networks, may not handle well their matchmaking problems with these newly emerging applications. There are already many communication-efficient application mapping algorithms for these typical non-random network topologies, which use nearby compute nodes to reduce the network distances. However, for the above unpredictable communication patterns, it is difficult to efficiently map their applications onto the non-random network topologies. In this context, we recommend using random network topologies as the communication infrastructures, which have drawn increasing attention for the use of HPC interconnects due to their small diameter and average shortest path length (ASPL). We make a comparative study to analyze the impact of application mapping performance on non-random and random network topologies. We propose using topology embedding metrics, i.e., diameter and ASPL, and list several diameter/ASPL-based application mapping algorithms to compare their job scheduling performances, assuming that the communication pattern of each application is unpredictable to the computing system. Evaluation with a large compound application workload shows that, when compared to non-random topologies, random topologies can reduce the average turnaround time up to 39.3% by a random connected mapping method and up to 72.1% by a diameter/ASPL-based mapping algorithm. Moreover, when compared to the baseline topology mapping method, the proposed diameter/ASPL-based topology mapping strategy can reduce up to 48.0% makespan and up to 78.1% average turnaround time, and improve up to 1.9x system utilization over random topologies.

Publication: IEICE TRANSACTIONS on Information Vol.E103-D No.12 pp.2480-2493

Publication Date: 2020/12/01

Publicized: 2020/07/20

Online ISSN: 1745-1361

DOI: 10.1587/transinf.2020PAP0006

Type of Manuscript: Special Section PAPER (Special Section on Parallel, Distributed, and Reconfigurable Computing, and Networking)

Category: Computer System

Authors

Yao HU
National Institute of Informatics
Michihiro KOIBUCHI
National Institute of Informatics

Keyword

high-performance computing (HPC), interconnection network, topology embedding, job scheduling

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Yao HU, Michihiro KOIBUCHI, "Application Mapping and Scheduling of Uncertain Communication Patterns onto Non-Random and Random Network Topologies" in IEICE TRANSACTIONS on Information, vol. E103-D, no. 12, pp. 2480-2493, December 2020, doi: 10.1587/transinf.2020PAP0006.
Abstract: Due to recent technology progress based on big-data processing, many applications present irregular or unpredictable communication patterns among compute nodes in high-performance computing (HPC) systems. Traditional communication infrastructures, e.g., torus or fat-tree interconnection networks, may not handle well their matchmaking problems with these newly emerging applications. There are already many communication-efficient application mapping algorithms for these typical non-random network topologies, which use nearby compute nodes to reduce the network distances. However, for the above unpredictable communication patterns, it is difficult to efficiently map their applications onto the non-random network topologies. In this context, we recommend using random network topologies as the communication infrastructures, which have drawn increasing attention for the use of HPC interconnects due to their small diameter and average shortest path length (ASPL). We make a comparative study to analyze the impact of application mapping performance on non-random and random network topologies. We propose using topology embedding metrics, i.e., diameter and ASPL, and list several diameter/ASPL-based application mapping algorithms to compare their job scheduling performances, assuming that the communication pattern of each application is unpredictable to the computing system. Evaluation with a large compound application workload shows that, when compared to non-random topologies, random topologies can reduce the average turnaround time up to 39.3% by a random connected mapping method and up to 72.1% by a diameter/ASPL-based mapping algorithm. Moreover, when compared to the baseline topology mapping method, the proposed diameter/ASPL-based topology mapping strategy can reduce up to 48.0% makespan and up to 78.1% average turnaround time, and improve up to 1.9x system utilization over random topologies.
URL: https://global.ieice.org/en_transactions/information/10.1587/transinf.2020PAP0006/_p

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@ARTICLE{e103-d_12_2480,
author={Yao HU, Michihiro KOIBUCHI, },
journal={IEICE TRANSACTIONS on Information},
title={Application Mapping and Scheduling of Uncertain Communication Patterns onto Non-Random and Random Network Topologies},
year={2020},
volume={E103-D},
number={12},
pages={2480-2493},
abstract={Due to recent technology progress based on big-data processing, many applications present irregular or unpredictable communication patterns among compute nodes in high-performance computing (HPC) systems. Traditional communication infrastructures, e.g., torus or fat-tree interconnection networks, may not handle well their matchmaking problems with these newly emerging applications. There are already many communication-efficient application mapping algorithms for these typical non-random network topologies, which use nearby compute nodes to reduce the network distances. However, for the above unpredictable communication patterns, it is difficult to efficiently map their applications onto the non-random network topologies. In this context, we recommend using random network topologies as the communication infrastructures, which have drawn increasing attention for the use of HPC interconnects due to their small diameter and average shortest path length (ASPL). We make a comparative study to analyze the impact of application mapping performance on non-random and random network topologies. We propose using topology embedding metrics, i.e., diameter and ASPL, and list several diameter/ASPL-based application mapping algorithms to compare their job scheduling performances, assuming that the communication pattern of each application is unpredictable to the computing system. Evaluation with a large compound application workload shows that, when compared to non-random topologies, random topologies can reduce the average turnaround time up to 39.3% by a random connected mapping method and up to 72.1% by a diameter/ASPL-based mapping algorithm. Moreover, when compared to the baseline topology mapping method, the proposed diameter/ASPL-based topology mapping strategy can reduce up to 48.0% makespan and up to 78.1% average turnaround time, and improve up to 1.9x system utilization over random topologies.},
keywords={},
doi={10.1587/transinf.2020PAP0006},
ISSN={1745-1361},
month={December},}

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TY - JOUR
TI - Application Mapping and Scheduling of Uncertain Communication Patterns onto Non-Random and Random Network Topologies
T2 - IEICE TRANSACTIONS on Information
SP - 2480
EP - 2493
AU - Yao HU
AU - Michihiro KOIBUCHI
PY - 2020
DO - 10.1587/transinf.2020PAP0006
JO - IEICE TRANSACTIONS on Information
SN - 1745-1361
VL - E103-D
IS - 12
JA - IEICE TRANSACTIONS on Information
Y1 - December 2020
AB - Due to recent technology progress based on big-data processing, many applications present irregular or unpredictable communication patterns among compute nodes in high-performance computing (HPC) systems. Traditional communication infrastructures, e.g., torus or fat-tree interconnection networks, may not handle well their matchmaking problems with these newly emerging applications. There are already many communication-efficient application mapping algorithms for these typical non-random network topologies, which use nearby compute nodes to reduce the network distances. However, for the above unpredictable communication patterns, it is difficult to efficiently map their applications onto the non-random network topologies. In this context, we recommend using random network topologies as the communication infrastructures, which have drawn increasing attention for the use of HPC interconnects due to their small diameter and average shortest path length (ASPL). We make a comparative study to analyze the impact of application mapping performance on non-random and random network topologies. We propose using topology embedding metrics, i.e., diameter and ASPL, and list several diameter/ASPL-based application mapping algorithms to compare their job scheduling performances, assuming that the communication pattern of each application is unpredictable to the computing system. Evaluation with a large compound application workload shows that, when compared to non-random topologies, random topologies can reduce the average turnaround time up to 39.3% by a random connected mapping method and up to 72.1% by a diameter/ASPL-based mapping algorithm. Moreover, when compared to the baseline topology mapping method, the proposed diameter/ASPL-based topology mapping strategy can reduce up to 48.0% makespan and up to 78.1% average turnaround time, and improve up to 1.9x system utilization over random topologies.
ER -