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[Author] Fuma MOTOYAMA(2hit)

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  • Fixed Point Preserving Model Reduction of Boolean Networks Focusing on Complement and Absorption Laws

    Fuma MOTOYAMA  Koichi KOBAYASHI  Yuh YAMASHITA  

     
    PAPER

      Pubricized:
    2022/10/24
      Vol:
    E106-A No:5
      Page(s):
    721-728

    A Boolean network (BN) is well known as a discrete model for analysis and control of complex networks such as gene regulatory networks. Since complex networks are large-scale in general, it is important to consider model reduction. In this paper, we consider model reduction that the information on fixed points (singleton attractors) is preserved. In model reduction studied here, the interaction graph obtained from a given BN is utilized. In the existing method, the minimum feedback vertex set (FVS) of the interaction graph is focused on. The dimension of the state is reduced to the number of elements of the minimum FVS. In the proposed method, we focus on complement and absorption laws of Boolean functions in substitution operations of a Boolean function into other one. By simplifying Boolean functions, the dimension of the state may be further reduced. Through a numerical example, we present that by the proposed method, the dimension of the state can be reduced for BNs that the dimension of the state cannot be reduced by the existing method.

  • A BDD-Based Approach to Finite-Time Control of Boolean Networks Open Access

    Fuma MOTOYAMA  Koichi KOBAYASHI  Yuh YAMASHITA  

     
    PAPER

      Pubricized:
    2023/10/23
      Vol:
    E107-A No:5
      Page(s):
    793-798

    Control of complex networks such as gene regulatory networks is one of the fundamental problems in control theory. A Boolean network (BN) is one of the mathematical models in complex networks, and represents the dynamic behavior by Boolean functions. In this paper, a solution method for the finite-time control problem of BNs is proposed using a BDD (binary decision diagram). In this problem, we find all combinations of the initial state and the control input sequence such that a certain control specification is satisfied. The use of BDDs enables us to solve this problem for BNs such that the conventional method cannot be applied. First, after the outline of BNs and BDDs is explained, the problem studied in this paper is given. Next, a solution method using BDDs is proposed. Finally, a numerical example on a 67-node BN is presented.