To improve the direction-of-arrival estimation performance of the small-aperture array, we propose a source localization method inspired by the Ormia fly’s coupled ears and MUSIC-like algorithm. The Ormia can local its host cricket’s sound precisely despite the tremendous incompatibility between the spacing of its ear and the sound wavelength. In this paper, we first implement a biologically inspired coupled system based on the coupled model of the Ormia’s ears and solve its responses by the modal decomposition method. Then, we analyze the effect of the system on the received signals of the array. Research shows that the system amplifies the amplitude ratio and phase difference between the signals, equivalent to creating a virtual array with a larger aperture. Finally, we apply the MUSIC-like algorithm for DOA estimation to suppress the colored noise caused by the system. Numerical results demonstrate that the proposed method can improve the localization precision and resolution of the array.